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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.2G167600.6.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 395aa MW: 43405.8 Da PI: 9.6814 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.6 | 2e-11 | 109 | 138 | 5 | 34 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeek 34 k rr+++NReAAr+sR+RKka+i++Le+ Sevir.2G167600.6.p 109 KTLRRLAQNREAARKSRLRKKAYIQQLETS 138 788************************974 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.3E-8 | 105 | 167 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.829 | 107 | 150 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-8 | 107 | 149 | No hit | No description |
SuperFamily | SSF57959 | 2.01E-7 | 109 | 143 | No hit | No description |
Pfam | PF00170 | 1.7E-8 | 109 | 138 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 112 | 127 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.1E-29 | 193 | 266 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence Send to blast |
MFALITTLSI AWFAETLNIF PSQPMHVAEP IPAKGVSMGM VAAMMPNGNS SSPRRQEEGG 60 QRSAPPPPAP AVPLPNSAKE NRSSLTKKEA TSGGKGATSG DQERVRDPKT LRRLAQNREA 120 ARKSRLRKKA YIQQLETSRI RLSQLEQQVQ VARVQGVFLG AGEQPAGFPS APSPAAVFDM 180 EYGRWVEEHS KLMFQLRAAL NEHMADEQLQ AFVNGAMAQH EELLNLKGAM ARADVFHLLS 240 GVWASPAERC FLWLGGFRPS EVIKVMLKHV EPLSEGQILG IYNLQQSVQE REEALNHTME 300 ATQQSISDIV AAPDVAPATF IGHMSLAMNK VASMESFVLQ ADGLRQQTLH KLHHILTTRQ 360 AARCMVAIAD YFHRLRALST LWVARPRQED GPGL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012698770.1 | 0.0 | PREDICTED: transcription factor TGA2-like isoform X2 | ||||
Swissprot | O24160 | 1e-113 | TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
TrEMBL | K3ZTN6 | 0.0 | K3ZTN6_SETIT; Uncharacterized protein | ||||
STRING | Si029966m | 0.0 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-128 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Sevir.2G167600.6.p |